[ 原始碼： prime-phylo ]
套件：prime-phylo（1.0.11-12）
prime-phylo 的相關連結
Debian 的資源：
下載原始碼套件 prime-phylo：
維護小組：
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Erik Sjolund (QA 頁面)
- Andreas Tille (QA 頁面)
- Étienne Mollier (QA 頁面)
外部的資源：
- 主頁 [prime.sbc.su.se]
相似套件：
bayesian estimation of gene trees taking the species tree into account
PrIME (Probabilistic Integrated Models of Evolution) is a package supporting inference of evolutionary parameters in a Bayesian framework using Markov chain Monte Carlo simulation. A distinguishing feature of PrIME is that the species tree is taken into account when analyzing gene trees.
The input data to PrIME is a multiple sequence alignment in FASTA format and the output data contains trees in Newick format.
其他與 prime-phylo 有關的套件
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虛擬套件由這些套件填實： libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libboost-mpi1.83.0 (>= 1.83.0)
- C++ interface to the Message Passing Interface (MPI)
-
- dep: libboost-serialization1.83.0 (>= 1.83.0)
- serialization library for C++
-
- dep: libc6 (>= 2.38)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
-
- dep: libgcc-s1 (>= 3.0) [amd64, s390x]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.4.4) [ppc64el]
- dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- 或者 liblapack.so.3
- 本虛擬套件由這些套件填實： liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
-
- dep: libstdc++6 (>= 14)
- GNU Standard C++ Library v3
-
- dep: libxml2 (>= 2.7.4)
- GNOME XML library
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- sug: mrbayes
- Bayesian Inference of Phylogeny
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- sug: muscle
- Multiple alignment program of protein sequences
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- sug: njplot
- phylogenetic tree drawing program
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- sug: phyml
- Phylogenetic estimation using Maximum Likelihood
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- sug: probalign
- multiple sequence alignment using partition function posterior probabilities
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- sug: python3-biopython
- Python3 library for bioinformatics
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- sug: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
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- sug: treeviewx
- Displays and prints phylogenetic trees