套件：maq（0.7.1-10）

[ 原始碼： maq  ]

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

標籤: 領域: 生物學, 生物資訊學, 實做語言: implemented-in::c++, implemented-in::perl, 使用者介面: 命令行, 角色: role::program, scope::utility, Purpose: 需要一個額外的標籤, Analysing, use::comparing, use::searching, 支援的格式: 需要一個額外的標籤, works-with-format::plaintext, works-with::TODO

其他與 maq 有關的套件

• dep: libc6 (>= 2.38)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.5) [armel, armhf]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 4.2) [除 amd64, armel, armhf, s390x]

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.2.3.3)

  壓縮函式庫 - 跑程式時用(runtime)

• sug: bwa

  Burrows-Wheeler Aligner

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

下載 maq

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	295。1 kB	545。0 kB	[檔案列表]
arm64	287。3 kB	581。0 kB	[檔案列表]
armel	284。3 kB	524。0 kB	[檔案列表]
armhf	286。4 kB	472。0 kB	[檔案列表]
i386	305。4 kB	581。0 kB	[檔案列表]
mips64el	296。6 kB	588。0 kB	[檔案列表]
ppc64el	303。5 kB	645。0 kB	[檔案列表]
riscv64	296。8 kB	493。0 kB	[檔案列表]
s390x	299。0 kB	557。0 kB	[檔案列表]