套件：zalign（0.9.1-5）

[ 原始碼： zalign  ]

parallel local alignment of biological sequences

zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task.

zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered.

其他與 zalign 有關的套件

• dep: libc6 (>= 2.14) [amd64]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [除 amd64, arm64, ppc64el]

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libopenmpi3 (>= 4.0.5)

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 4.9)

  GNU Standard C++ Library v3

下載 zalign

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	47。9 kB	267。0 kB	[檔案列表]
arm64	45。1 kB	263。0 kB	[檔案列表]
armel	25。4 kB	117。0 kB	[檔案列表]
armhf	25。6 kB	97。0 kB	[檔案列表]
i386	48。4 kB	261。0 kB	[檔案列表]
mips64el	50。3 kB	550。0 kB	[檔案列表]
mipsel	48。9 kB	318。0 kB	[檔案列表]
ppc64el	50。7 kB	415。0 kB	[檔案列表]
s390x	46。5 kB	287。0 kB	[檔案列表]