[ 原始碼: cyvcf2 ]
套件:python3-cyvcf2(0.30.18-1 以及其他的)
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
其他與 python3-cyvcf2 有關的套件
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- dep: libc6 (>= 2.14) [amd64]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.7) [除 amd64, arm64, ppc64el]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.12)
- dep: python3 (>= 3.11~)
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- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
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- dep: python3-coloredlogs
- colored terminal output for Python 3's logging module
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- dep: python3-numpy (>= 1:1.22.0)
- Fast array facility to the Python 3 language
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- dep: python3-numpy-abi9
- 本虛擬套件由這些套件填實: python3-numpy
下載 python3-cyvcf2
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
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amd64 | 0.30.18-1+b2 | 783。8 kB | 4,710。0 kB | [檔案列表] |
arm64 | 0.30.18-1+b2 | 755。0 kB | 4,725。0 kB | [檔案列表] |
armel | 0.30.18-1+b2 | 753。1 kB | 4,624。0 kB | [檔案列表] |
armhf | 0.30.18-1+b2 | 754。1 kB | 4,452。0 kB | [檔案列表] |
i386 | 0.30.18-1+b2 | 782。4 kB | 4,726。0 kB | [檔案列表] |
mips64el | 0.30.18-1+b2 | 735。7 kB | 4,740。0 kB | [檔案列表] |
mipsel | 0.30.18-1+b2 | 735。5 kB | 4,719。0 kB | [檔案列表] |
ppc64el | 0.30.18-1+b2 | 778。0 kB | 4,853。0 kB | [檔案列表] |
s390x | 0.30.18-1+b2 | 745。3 kB | 4,708。0 kB | [檔案列表] |