[ 原始碼： r-bioc-structuralvariantannotation ]
套件：r-bioc-structuralvariantannotation（1.13.0+ds-1）
r-bioc-structuralvariantannotation 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-structuralvariantannotation：
- [r-bioc-structuralvariantannotation_1.13.0+ds-1.dsc]
- [r-bioc-structuralvariantannotation_1.13.0+ds.orig.tar.xz]
- [r-bioc-structuralvariantannotation_1.13.0+ds-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
Variant annotations for structural variants
StructuralVariantAnnotation contains useful helper functions for dealing with structural variants in VCF format. The packages contains functions for parsing VCFs from a number of popular callers as well as functions for dealing with breakpoints involving two separate genomic loci encoded as GRanges objects.
其他與 r-bioc-structuralvariantannotation 有關的套件
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
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- dep: r-bioc-biostrings
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
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- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment
- BioConductor assay container
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- dep: r-bioc-variantannotation
- BioConductor annotation of genetic variants
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- dep: r-cran-assertthat
- GNU R easy pre and post assertions
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- dep: r-cran-dplyr
- GNU R grammar of data manipulation
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- dep: r-cran-rlang
- Functions for Base Types and Core R and 'Tidyverse' Features
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- dep: r-cran-stringr
- Make it easier to work with strings
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- sug: r-bioc-biovizbase
- GNU R basic graphic utilities for visualization of genomic data
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- sug: r-bioc-ggbio
- Visualization tools for genomic data
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- sug: r-cran-devtools
- Tools to Make Developing R Packages Easier
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- sug: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-roxygen2
- in-line documentation for GNU R
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- sug: r-cran-testthat (>= 2.1.0)
- GNU R testsuite
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- sug: r-cran-tidyverse
- Easily Install and Load the 'Tidyverse'