[ 源代码： r-bioc-structuralvariantannotation ]
软件包：r-bioc-structuralvariantannotation（1.13.0+ds-1）
r-bioc-structuralvariantannotation 的相关链接
Debian 的资源：
下载源码包 r-bioc-structuralvariantannotation：
- [r-bioc-structuralvariantannotation_1.13.0+ds-1.dsc]
- [r-bioc-structuralvariantannotation_1.13.0+ds.orig.tar.xz]
- [r-bioc-structuralvariantannotation_1.13.0+ds-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [bioconductor.org]
相似软件包：
Variant annotations for structural variants
StructuralVariantAnnotation contains useful helper functions for dealing with structural variants in VCF format. The packages contains functions for parsing VCFs from a number of popular callers as well as functions for dealing with breakpoints involving two separate genomic loci encoded as GRanges objects.
其他与 r-bioc-structuralvariantannotation 有关的软件包
|
|
|
|
-
- dep: r-api-4.0
- 本虚包由这些包填实： r-base-core
-
- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
-
- dep: r-bioc-biostrings
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
-
- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment
- BioConductor assay container
-
- dep: r-bioc-variantannotation
- BioConductor annotation of genetic variants
-
- dep: r-cran-assertthat
- GNU R easy pre and post assertions
-
- dep: r-cran-dplyr
- GNU R grammar of data manipulation
-
- dep: r-cran-rlang
- Functions for Base Types and Core R and 'Tidyverse' Features
-
- dep: r-cran-stringr
- Make it easier to work with strings
-
- sug: r-bioc-biovizbase
- GNU R basic graphic utilities for visualization of genomic data
-
- sug: r-bioc-ggbio
- Visualization tools for genomic data
-
- sug: r-cran-devtools
- Tools to Make Developing R Packages Easier
-
- sug: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
-
- sug: r-cran-roxygen2
- in-line documentation for GNU R
-
- sug: r-cran-testthat (>= 2.1.0)
- GNU R testsuite
-
- sug: r-cran-tidyverse
- Easily Install and Load the 'Tidyverse'