[ trixie ]
[ sid ]
[ 源代码: bifrost ]
软件包:libbifrost-dev(1.3.1-1 以及其他的)
static library and header files for libbifrost
Libbifrost-dev is the development library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.
* Build, index, color and query the compacted de Bruijn graph * No need to build the uncompacted de Bruijn graph * Reads or assembled genomes as input * Output graph in GFA (can be visualized with Bandage), FASTA or binary * Graph cleaning: short tip clipping, etc. * Multi-threaded * No parameters to estimate with other tools * Exact or approximate k-mer search of queries
其他与 libbifrost-dev 有关的软件包
|
|
|
|
-
- dep: libbifrost0 (= 1.3.1-1) [除 arm64]
- library for parallel construction, indexing and querying of de Bruijn graphs
- dep: libbifrost0 (= 1.3.1-1+b1) [arm64]
下载 libbifrost-dev
硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
---|---|---|---|---|
amd64 | 1.3.1-1 | 588.8 kB | 3,858.0 kB | [文件列表] |
arm64 | 1.3.1-1+b1 | 576.0 kB | 3,803.0 kB | [文件列表] |
mips64el | 1.3.1-1 | 612.3 kB | 4,463.0 kB | [文件列表] |
ppc64el | 1.3.1-1 | 619.4 kB | 4,138.0 kB | [文件列表] |
riscv64 | 1.3.1-1 | 1,790.5 kB | 18,705.0 kB | [文件列表] |
s390x | 1.3.1-1 | 610.5 kB | 4,019.0 kB | [文件列表] |