源码包：trinityrnaseq（2.11.0+dfsg-6）
本源码包构建了以下这些二进制包：
- trinityrnaseq
- RNA-Seq De novo Assembly
- trinityrnaseq-examples
- RNA-Seq De novo Assembly common example and testing files
其他与 trinityrnaseq 有关的软件包
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- adep: debhelper-compat (= 13)
- 软件包暂时不可用
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- adep: jellyfish
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- adep: libjung-free-java
- Java Universal Network/Graph Framework
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- adep: javahelper
- Helper scripts for packaging Java programs
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- adep: libgetopt-java
- GNU getopt - Java port
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- adep: default-jdk
- Standard Java or Java compatible Development Kit
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- adep: parafly
- parallel command processing using OpenMP
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- adep: libjs-jquery
- JavaScript library for dynamic web applications
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- adep: jaligner
- Smith-Waterman algorithm with Gotoh's improvement
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- adep: libhts-dev
- development files for the HTSlib
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- adep: bowtie2
- ultrafast memory-efficient short read aligner
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- adep: salmon
- wicked-fast transcript quantification from RNA-seq data
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- adep: zlib1g-dev
- 压缩库 - 开发文件
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- adep: cmake
- cross-platform, open-source make system
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- adep: r-bioc-edger
- Empirical analysis of digital gene expression data in R
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- adep: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
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- adep: r-bioc-rots
- GNU R Teproducibility-Optimized Test Statistic
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- adep: r-cran-fastcluster
- Fast hierarchical clustering routines for GNU R
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- adep: liburi-perl
- module to manipulate and access URI strings
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- adep: r-cran-ape
- GNU R package for Analyses of Phylogenetics and Evolution
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- adep: r-bioc-ctc
- Cluster and Tree Conversion
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- adep: r-cran-gplots
- GNU R package with tools for plotting data by Greg Warnes et al
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- adep: r-cran-readr
- GNU R package to read rectangular text data
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- adep: r-bioc-biobase
- base functions for Bioconductor
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- adep: r-bioc-qvalue
- GNU R package for Q-value estimation for FDR control
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- adep: r-bioc-goseq
- GNU R gene ontology analyser for RNA-seq and other length biased data
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- adep: r-bioc-tximport
- transcript-level estimates for biological sequencing
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- adep: python3-htseq
- Python3 high-throughput genome sequencing read analysis utilities
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- adep: rna-star
- ultrafast universal RNA-seq aligner
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- adep: picard-tools
- Command line tools to manipulate SAM and BAM files
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- adep: gmap
- spliced and SNP-tolerant alignment for mRNA and short reads
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- adep: hisat2
- graph-based alignment of short nucleotide reads to many genomes
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- adep: subread
- toolkit for processing next-gen sequencing data
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- adep: kallisto
- near-optimal RNA-Seq quantification
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- adep: python3-hisat2
- Python scripts accompanying hisat2
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- adep: r-cran-argparse
- GNU R command line parser for optional and positional arguments
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- adep: r-bioc-dexseq
- GNU R inference of differential exon usage in RNA-Seq
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- adep: tabix
- generic indexer for TAB-delimited genome position files
Download trinityrnaseq
| 文件 | 大小（单位：kB） | MD5 校验码 |
|---|---|---|
| trinityrnaseq_2.11.0+dfsg-6.dsc | 2.6 kB | 6ba35733e0ea439b6af60aa571b2ccb0 |
| trinityrnaseq_2.11.0+dfsg.orig.tar.xz | 252,695.0 kB | a877bd080145ccb922f3906dcd5e9efc |
| trinityrnaseq_2.11.0+dfsg-6.debian.tar.xz | 148.6 kB | 7180988fa4cbd3d8b9f85ac8a1b0c702 |
- Debian 软件包源码仓库（VCS：Git）
- https://salsa.debian.org/med-team/trinityrnaseq.git
- Debian 软件包源码仓库（可在线浏览）
- https://salsa.debian.org/med-team/trinityrnaseq