软件包：hts-nim-tools（0.2.1-1） [debports]
tools biological sequences: bam-filter, count-reads, vcf-check
This package provides several tools that (at least at the time of their creation) provide functionalities beyond the routine provided by samtools and other reverse dependencies of the htslib.
These new tools are
• bam-filter : filter BAM/CRAM/SAM files with a simple expression language • count-reads: count BAM/CRAM reads in regions given in a BED file • vcf-check : check regions of a VCF against a background for missing chunks
and yes, as the name suggests, these tools are all implemented in nim, using the nim-hts (upstream: hts-nim) wrapper for the htslib.
其他与 hts-nim-tools 有关的软件包
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- dep: libc6 (>= 2.29)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: nim-hts-dev
- wrapper for hts C library