[ 源代码： r-bioc-genomicalignments ]
软件包：r-bioc-genomicalignments（1.18.1-1）
r-bioc-genomicalignments 的相关链接
Debian 的资源：
下载源码包 r-bioc-genomicalignments：
- [r-bioc-genomicalignments_1.18.1-1.dsc]
- [r-bioc-genomicalignments_1.18.1.orig.tar.gz]
- [r-bioc-genomicalignments_1.18.1-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [bioconductor.org]
相似软件包：
BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
其他与 r-bioc-genomicalignments 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.17) [arm64]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.4) [除 arm64]
-
- dep: r-api-3.5
- 本虚包由这些包填实： r-base-core
-
- dep: r-api-bioc-3.8
- 本虚包由这些包填实： r-bioc-biocgenerics
-
- dep: r-base-core (>= 3.5.2-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biocgenerics (>= 0.15.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.13.1)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicranges (>= 1.33.4)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.15.12)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.19.11)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.9.13)
- BioConductor assay container
-
- rec: r-bioc-shortread (>= 1.24.0)
- GNU R classes and methods for high-throughput short-read sequencing data
-
- rec: r-cran-runit
- GNU R package providing unit testing framework
-
- sug: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
-
- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks