软件包：indelible（1.03-5）

[ 源代码： indelible  ]

powerful and flexible simulator of biological evolution

INDELible is a new, portable, and flexible application for biological sequence simulation that combines many features in the same place for the first time. Using a length-dependent model of indel formation it can simulate evolution of multi-partitioned nucleotide, amino-acid, or codon data sets through the processes of insertion, deletion, and substitution in continuous time.

Nucleotide simulations may use the general unrestricted model or the general time reversible model and its derivatives, and amino-acid simulations can be conducted using fifteen different empirical rate matrices. Substitution rate heterogeneity can be modeled via the continuous and discrete gamma distributions, with or without a proportion of invariant sites. INDELible can also simulate under non-homogeneous and non-stationary conditions where evolutionary models are permitted to change across a phylogeny.

Unique among indel simulation programs, INDELible offers the ability to simulate using codon models that exhibit nonsynonymous/synonymous rate ratio heterogeneity among sites and/or lineages.

其他与 indelible 有关的软件包

• dep: libc6 (>= 2.29)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支持库

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 9)

  GNU 标准 C++ 库，第3版

下载 indelible

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
amd64	409.5 kB	1,463.0 kB	[文件列表]
arm64	371.6 kB	1,291.0 kB	[文件列表]
armel	395.9 kB	1,398.0 kB	[文件列表]
armhf	402.3 kB	1,194.0 kB	[文件列表]
i386	411.5 kB	1,514.0 kB	[文件列表]
mips64el	375.9 kB	1,444.0 kB	[文件列表]
mipsel	390.3 kB	1,497.0 kB	[文件列表]
ppc64el	398.7 kB	1,439.0 kB	[文件列表]
s390x	363.4 kB	1,387.0 kB	[文件列表]