Paket: skewer (0.2.2-6) [debports]

[ Kaynak:  ]

post-processing of high-throughput DNA sequence reads

skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.

Features

 * Detection and removal of adapter sequences
 * Insertion and deletion allowed in pattern matching
 * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
 * Demultiplexing of barcoded sequencing runs
 * Multi-threading support
 * Trimming based on phred quality scores
 * IUPAC characters for barcodes and adapters
 * Compressed input and output support

skewer ile İlgili Diğer Paketler

• dep: libc6.1 (>= 2.32)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libunwind8

  library to determine the call-chain of a program - runtime

skewer indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
ia64 (resmi olmayan port)	107,3 kB	387,0 kB	[dosya listesi]