tüm seçenekler
bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Kaynak: r-bioc-dada2  ]

Paket: r-bioc-dada2 (1.18.0+dfsg-1)

r-bioc-dada2 için bağlantılar

Screenshot

Debian Kaynakları:

r-bioc-dada2 Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Benzer paketler:

sample inference from amplicon sequencing data

The dada2 package contributes to software workflows to interpret sequencing data from microbiota - the relative abundance of bacterial and/or yeast, typically measured in the gut. It infers exact amplicon sequence variants (ASVs) from high-throughput amplicon sequencing data, replacing the coarser and less accurate OTU clustering approach. The dada2 pipeline takes as input demultiplexed fastq files, and outputs the sequence variants and their sample-wise abundances after removing substitution and chimera errors. Taxonomic classification is available via a native implementation of the RDP naive Bayesian classifier, and species-level assignment to 16S rRNA gene fragments by exact matching.

r-bioc-dada2 ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • enhances

r-bioc-dada2 indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 1.838,1 kB2.182,0 kB [dosya listesi]