Paket: mash (2.3+dfsg-3 ve diğerleri)

[ Kaynak: mash  ]

fast genome and metagenome distance estimation using MinHash

Mash uses MinHash locality-sensitive hashing to reduce large biosequences to a representative sketch and rapidly estimate pairwise distances between genomes or metagenomes. Mash sketch databases effectively delineate known species boundaries, allow construction of approximate phylogenies, and can be searched in seconds using assembled genomes or raw sequencing runs from Illumina, Pacific Biosciences, and Oxford Nanopore. For metagenomics, Mash scales to thousands of samples and can replicate Human Microbiome Project and Global Ocean Survey results in a fraction of the time.

mash ile İlgili Diğer Paketler

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libcapnp-0.9.2

  Cap'n Proto C++ library

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: libgsl27 (>= 2.7.1)

  GNU Scientific Library (GSL) -- library package

• dep: libmurmurhash2 (>= 0.2)

  Portable MurmurHash Implementation

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

mash indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	2.3+dfsg-3+b1	183,9 kB	558,0 kB	[dosya listesi]
arm64	2.3+dfsg-3+b1	161,6 kB	490,0 kB	[dosya listesi]
mips64el	2.3+dfsg-3+b1	165,1 kB	636,0 kB	[dosya listesi]
ppc64el	2.3+dfsg-3+b1	185,3 kB	618,0 kB	[dosya listesi]
s390x	2.3+dfsg-3+b1	160,9 kB	554,0 kB	[dosya listesi]