Paket: biobambam2 (2.0.185+ds-1)

[ Kaynak: biobambam2  ]

tools for early stage alignment file processing

This package contains some tools for processing BAM files, including

  bamsormadup:  parallel sorting and duplicate marking
  bamcollate2:  reads BAM and writes BAM reordered such that alignment
                or collated by query name
  bammarkduplicates: reads BAM and writes BAM with duplicate alignments
                marked using the BAM flags field
  bammaskflags: reads BAM and writes BAM while masking (removing) bits
                from the flags column
  bamrecompress: reads BAM and writes BAM with a defined compression
                 setting. This tool is capable of multi-threading.
  bamsort:       reads BAM and writes BAM resorted by coordinates or
                 query name
  bamtofastq:    reads BAM and writes FastQ; output can be collated
                 or uncollated by query name

biobambam2 ile İlgili Diğer Paketler

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 3.0) [arm64, ppc64el]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [amd64]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libmaus2-2 (>= 2.0.813+ds)

  collection of data structures and algorithms for biobambam

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

biobambam2 indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	9.346,1 kB	64.727,0 kB	[dosya listesi]
arm64	8.478,3 kB	63.459,0 kB	[dosya listesi]
i386	9.987,0 kB	72.831,0 kB	[dosya listesi]
ppc64el	9.189,8 kB	78.371,0 kB	[dosya listesi]