Paket: libbio-db-hts-perl (3.01-5)

[ Källkod: libbio-db-hts-perl  ]

Perl interface to the HTS library

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package provides a Perl interface to the HTS library.

Andra paket besläktade med libbio-db-hts-perl

• dep: libbio-perl-perl

  BioPerl core perl modules

• dep: libc6 (>= 2.22)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: perl (>= 5.40.0-6)

  Larry Wall's Practical Extraction and Report Language

• dep: perlapi-5.40.0

  virtuellt paket som tillhandahålls av perl-base

• dep: zlib1g (>= 1:1.2.3.3)

  Kompressionsbibliotek - körtidspaket

Hämta libbio-db-hts-perl

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
ppc64el	136,6 kbyte	540,0 kbyte	[filförteckning]