Paket: r-bioc-rsamtools (2.18.0+dfsg-1 och andra)

[ Källkod: r-bioc-rsamtools  ]

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

Andra paket besläktade med r-bioc-rsamtools

• dep: libbz2-1.0

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• dep: libc6 (>= 2.34)

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• dep: libcurl4t64 (>= 7.18.0)

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• dep: libgcc-s1 (>= 3.0)

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• dep: liblzma5 (>= 5.1.1alpha+20120614)

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• dep: libstdc++6 (>= 11)

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• dep: r-api-4.0

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• dep: r-api-bioc-3.18

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-bioc-biocgenerics (>= 0.25.1)

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biostrings (>= 2.47.6)

  GNU R string objects representing biological sequences

• dep: r-bioc-genomeinfodb (>= 1.1.3)

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• dep: r-bioc-genomicranges (>= 1.31.8)

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• dep: r-bioc-iranges (>= 2.13.12)

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• dep: r-bioc-rhtslib (>= 1.99.3)

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• dep: r-bioc-s4vectors (>= 0.17.25)

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• dep: r-bioc-xvector (>= 0.19.7)

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• dep: r-bioc-zlibbioc

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• dep: r-cran-bitops

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• dep: zlib1g (>= 1:1.2.3.3)

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• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-genomicalignments

  BioConductor representation and manipulation of short genomic alignments

• sug: r-bioc-genomicfeatures

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• sug: r-bioc-shortread (>= 1.19.10)

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• sug: r-cran-knitr

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• sug: r-cran-runit

  GNU R package providing unit testing framework

Hämta r-bioc-rsamtools

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	2.18.0+dfsg-1+b1	3.500,1 kbyte	5.581,0 kbyte	[filförteckning]
arm64	2.18.0+dfsg-1+b1	3.456,7 kbyte	5.585,0 kbyte	[filförteckning]
mips64el	2.18.0+dfsg-1+b1	3.452,0 kbyte	5.771,0 kbyte	[filförteckning]
ppc64el	2.18.0+dfsg-1+b1	3.545,3 kbyte	5.969,0 kbyte	[filförteckning]
s390x	2.18.0+dfsg-1+b1	3.509,8 kbyte	5.713,0 kbyte	[filförteckning]