Paket: proteinortho (5.16.b+dfsg-1)

[ Källkod: proteinortho  ]

Detection of (Co-)orthologs in large-scale protein analysis

Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.

Andra paket besläktade med proteinortho

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.3.4) [i386]

  dep: libc6 (>= 2.4) [armhf]

• dep: libgcc1 (>= 1:3.0) [ej armhf]

  GCC stödbibliotek

  dep: libgcc1 (>= 1:3.5) [armhf]

• dep: libstdc++6 (>= 5.2)

  GNU standardbibliotek v3 för C++

• dep: ncbi-blast+

  next generation suite of BLAST sequence search tools

• dep: python

  interactive high-level object-oriented language (Python2 version)

Hämta proteinortho

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	139,9 kbyte	292,0 kbyte	[filförteckning]
arm64	137,0 kbyte	276,0 kbyte	[filförteckning]
armhf	134,9 kbyte	255,0 kbyte	[filförteckning]
i386	141,2 kbyte	287,0 kbyte	[filförteckning]