Paket: density-fitness (1.0.0-2)

[ Källkod: density-fitness  ]

Calculates per-residue electron density scores

The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.

For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.

This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.

Andra paket besläktade med density-fitness

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  Boost.Iostreams Library

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  program options library for C++

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [ej amd64, arm64, ppc64el]

• dep: libcifpp1 (>= 1.0.1)

  Library files for libcifpp

• dep: libclipper2 (>= 2.1.20201109)

  object oriented library for crystallographic computing

• dep: libgcc-s1 (>= 3.0) [ej armel, armhf]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libpdb-redo1 (>= 1.0.1) [mips64el, mipsel]

  Library file for libpdb-redo

  dep: libpdb-redo1 (>= 1.0.2) [ej mips64el, mipsel]

• dep: libstdc++6 (>= 10.2) [armel]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 9) [ej armel]

• dep: libzeep5 (>= 5.0.2)

  Library file for libzeep

Hämta density-fitness

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	101,7 kbyte	375,0 kbyte	[filförteckning]
arm64	93,6 kbyte	359,0 kbyte	[filförteckning]
armel	85,3 kbyte	314,0 kbyte	[filförteckning]
armhf	86,6 kbyte	254,0 kbyte	[filförteckning]
i386	106,5 kbyte	361,0 kbyte	[filförteckning]
mips64el	95,9 kbyte	437,0 kbyte	[filförteckning]
mipsel	95,2 kbyte	405,0 kbyte	[filförteckning]
ppc64el	105,4 kbyte	467,0 kbyte	[filförteckning]
s390x	92,9 kbyte	383,0 kbyte	[filförteckning]