Balík: density-fitness (1.0.0-2)

[ Zdroj: density-fitness  ]

Calculates per-residue electron density scores

The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.

For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.

This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.

Ostatné balíky súvisiace s balíkom density-fitness

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  knižnica Boost.Iostreams

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  knižnica volieb programu pre C++

• dep: libc6 (>= 2.14) [amd64]

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [nie amd64, arm64, ppc64el]

• dep: libcifpp1 (>= 1.0.1)

  Library files for libcifpp

• dep: libclipper2 (>= 2.1.20201109)

  object oriented library for crystallographic computing

• dep: libgcc-s1 (>= 3.0) [nie armel, armhf]

  podporná knižnica GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libpdb-redo1 (>= 1.0.1) [mips64el, mipsel]

  Library file for libpdb-redo

  dep: libpdb-redo1 (>= 1.0.2) [nie mips64el, mipsel]

• dep: libstdc++6 (>= 10.2) [armel]

  štandardná knižnica C++ GNU v3

  dep: libstdc++6 (>= 9) [nie armel]

• dep: libzeep5 (>= 5.0.2)

  Library file for libzeep

Stiahnuť density-fitness

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	101.7 kB	375.0 kB	[zoznam súborov]
arm64	93.6 kB	359.0 kB	[zoznam súborov]
armel	85.3 kB	314.0 kB	[zoznam súborov]
armhf	86.6 kB	254.0 kB	[zoznam súborov]
i386	106.5 kB	361.0 kB	[zoznam súborov]
mips64el	95.9 kB	437.0 kB	[zoznam súborov]
mipsel	95.2 kB	405.0 kB	[zoznam súborov]
ppc64el	105.4 kB	467.0 kB	[zoznam súborov]
s390x	92.9 kB	383.0 kB	[zoznam súborov]