Paket: unifrac-tools (1.2-2)

[ Källkod: unifrac-tools  ]

high-performance phylogenetic diversity calculations (binaries)

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains target binaries ssu and faithpd

Andra paket besläktade med unifrac-tools

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  eller libblas.so.3

  virtuellt paket som tillhandahålls av libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.5)

  GCC stödbibliotek

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: liblapacke (>= 3.11.0)

  Library of linear algebra routines 3 - C lib shared version

• dep: liblz4-1 (>= 0.0~r130)

  Fast LZ compression algorithm library - runtime

• dep: libssu0

  high-performance phylogenetic diversity calculations (lib)

• dep: libstdc++6 (>= 11)

  GNU standardbibliotek v3 för C++

• dep: libsz2 (>= 1.0.6)

  Adaptive Entropy Coding library - SZIP

• dep: zlib1g (>= 1:1.1.4)

  Kompressionsbibliotek - körtidspaket

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Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
armel	1.408,9 kbyte	9.010,0 kbyte	[filförteckning]