Balík: biobambam2 (2.0.185+ds-2)

[ Zdroj: biobambam2  ]

tools for early stage alignment file processing

This package contains some tools for processing BAM files, including

  bamsormadup:  parallel sorting and duplicate marking
  bamcollate2:  reads BAM and writes BAM reordered such that alignment
                or collated by query name
  bammarkduplicates: reads BAM and writes BAM with duplicate alignments
                marked using the BAM flags field
  bammaskflags: reads BAM and writes BAM while masking (removing) bits
                from the flags column
  bamrecompress: reads BAM and writes BAM with a defined compression
                 setting. This tool is capable of multi-threading.
  bamsort:       reads BAM and writes BAM resorted by coordinates or
                 query name
  bamtofastq:    reads BAM and writes FastQ; output can be collated
                 or uncollated by query name

Ostatné balíky súvisiace s balíkom biobambam2

• dep: libc6 (>= 2.34)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libgcc-s1 (>= 3.0) [ppc64el]

  podporná knižnica GCC

  dep: libgcc-s1 (>= 3.4) [nie i386, ppc64el]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libgomp1 (>= 6)

  podporná knižnica GCC OpenMP (GOMP)

• dep: libmaus2-2 (>= 2.0.813+ds)

  collection of data structures and algorithms for biobambam

• dep: libstdc++6 (>= 13.1)

  štandardná knižnica C++ GNU v3

• dep: zlib1g (>= 1:1.1.4)

  komprimačná knižnica - dynamická verzia

Stiahnuť biobambam2

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	9,203.8 kB	64,327.0 kB	[zoznam súborov]
i386	9,933.6 kB	71,707.0 kB	[zoznam súborov]
mips64el	7,602.0 kB	75,740.0 kB	[zoznam súborov]
ppc64el	8,944.3 kB	76,579.0 kB	[zoznam súborov]
riscv64	8,815.6 kB	51,675.0 kB	[zoznam súborov]