Balík: proteinortho (6.1.7+dfsg-1)

[ Zdroj: proteinortho  ]

Detection of (Co-)orthologs in large-scale protein analysis

Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.

Ostatné balíky súvisiace s balíkom proteinortho

• dep: diamond-aligner (>= 2.0.10~)

  accelerated BLAST compatible local sequence aligner

• dep: libc6 (>= 2.34)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  podporná knižnica GCC

• dep: libgomp1 (>= 4.9)

  podporná knižnica GCC OpenMP (GOMP)

• dep: liblapack3

  knižnica rutín lineárnej algebry, verzia 3 - zdieľaná knižnica

• dep: libstdc++6 (>= 12)

  štandardná knižnica C++ GNU v3

• dep: ncbi-blast+

  next generation suite of BLAST sequence search tools

• dep: perl

  Practical Extraction and Report Language od Larryho Walla

• dep: procps

  nástroje pre súborový systém /proc

• dep: python3

  interactive high-level object-oriented language (default python3 version)

Stiahnuť proteinortho

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
s390x	247.9 kB	967.0 kB	[zoznam súborov]