Package: libhts3t64 (1.20+ds-2 and others)

[ Source: htslib  ]

C library for high-throughput sequencing data formats

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

Other Packages Related to libhts3t64

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• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

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  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

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  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcurl3-gnutls (>= 7.18.0) [ia64]

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• dep: libcurl3t64-gnutls (>= 7.18.0) [not ia64]

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• dep: libdeflate0 (>= 1.0)

  fast, whole-buffer DEFLATE-based compression and decompression

• dep: libhtscodecs2 (>= 1.3.0)

  Custom compression for CRAM and others

• dep: liblzma5 (>= 5.1.1alpha+20120614)

  XZ-format compression library

• dep: libssl3t64 (>= 3.0.0)

  Secure Sockets Layer toolkit - shared libraries

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Download libhts3t64

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.20+ds-2	440.5 kB	1,406.0 kB	[list of files]
amd64	1.20+ds-2	444.5 kB	1,108.0 kB	[list of files]
arm64	1.20+ds-2	410.4 kB	1,272.0 kB	[list of files]
armel	1.20+ds-2	386.9 kB	975.0 kB	[list of files]
armhf	1.20+ds-2	391.5 kB	739.0 kB	[list of files]
hppa (unofficial port)	1.20+ds-2	452.4 kB	1,180.0 kB	[list of files]
i386	1.20+ds-2	488.3 kB	1,219.0 kB	[list of files]
ia64 (unofficial port)	1.19+ds-1.1+b1	550.8 kB	2,073.0 kB	[list of files]
m68k (unofficial port)	1.20+ds-2	391.8 kB	971.0 kB	[list of files]
mips64el	1.20+ds-2	399.1 kB	1,382.0 kB	[list of files]
ppc64 (unofficial port)	1.20+ds-2	468.8 kB	1,591.0 kB	[list of files]
ppc64el	1.20+ds-2	481.1 kB	1,527.0 kB	[list of files]
riscv64	1.20+ds-2	453.2 kB	924.0 kB	[list of files]
s390x	1.20+ds-2	446.2 kB	1,171.0 kB	[list of files]
sh4 (unofficial port)	1.20+ds-2	494.1 kB	1,142.0 kB	[list of files]
sparc64 (unofficial port)	1.20+ds-2	385.7 kB	5,264.0 kB	[list of files]
x32 (unofficial port)	1.20+ds-2	446.4 kB	1,067.0 kB	[list of files]