Package: tvc (5.0.3+git20151221.80e144e+dfsg-3 and others)

[ Source: tvc  ]

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

Other Packages Related to tvc

• dep: libarmadillo10 (>= 1:10.1.2+dfsg)

  streamlined C++ linear algebra library

• dep: libbamtools2.5.1 (>= 2.5.1+dfsg)

  dynamic library for manipulating BAM (genome alignment) files

• dep: libc6 (>= 2.29)

  GNU Biblioteca C: Bibliotecas compartilhadas
  also a virtual package provided by libc6-udeb

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libgcc-s1 (>= 3.0) [amd64, i386, mipsel, s390x]

  Biblioteca de suporte GCC

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el]

• dep: libjsoncpp24 (>= 1.9.4)

  library for reading and writing JSON for C++

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 5.2) [armel, armhf]

  Biblioteca C++ padrão da GNU v3

  dep: libstdc++6 (>= 9) [not armel, armhf]

• dep: python3

  linguagem orientada a objetos de alto nível e interativa (versão padrão da python3)

• dep: zlib1g (>= 1:1.1.4)

  biblioteca de compressão - runtime (tempo de execução)

Download tvc

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	5.0.3+git20151221.80e144e+dfsg-3+b2	1,050.4 kB	3,406.0 kB	[list of files]
arm64	5.0.3+git20151221.80e144e+dfsg-3+b2	979.3 kB	3,194.0 kB	[list of files]
armel	5.0.3+git20151221.80e144e+dfsg-3+b2	940.0 kB	3,090.0 kB	[list of files]
armhf	5.0.3+git20151221.80e144e+dfsg-3+b2	958.2 kB	2,658.0 kB	[list of files]
i386	5.0.3+git20151221.80e144e+dfsg-3+b2	1,082.4 kB	3,453.0 kB	[list of files]
mips64el	5.0.3+git20151221.80e144e+dfsg-3+b2	994.0 kB	3,670.0 kB	[list of files]
mipsel	5.0.3+git20151221.80e144e+dfsg-3+b2	993.5 kB	3,575.0 kB	[list of files]
ppc64el	5.0.3+git20151221.80e144e+dfsg-3+b2	1,056.5 kB	3,734.0 kB	[list of files]
s390x	5.0.3+git20151221.80e144e+dfsg-3+b2	978.2 kB	3,425.0 kB	[list of files]