Package: libbwa-dev (0.7.17-7 and others)

[ Source: bwa  ]

Burrows-Wheeler Aligner source files

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

This package contains the source files for use in other programs.

Tags: Software Development: Libraries, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, Role: role::devel-lib, role::program, Source Code, Purpose: use::comparing, works-with::biological-sequence

Other Packages Related to libbwa-dev

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

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Architecture	Version	Package Size	Installed Size	Files
amd64	0.7.17-7+b2	152.7 kB	471.0 kB	[list of files]
arm64	0.7.17-7+b2	143.1 kB	457.0 kB	[list of files]
armel	0.7.17-7+b2	143.6 kB	420.0 kB	[list of files]
armhf	0.7.17-7+b2	144.0 kB	353.0 kB	[list of files]
i386	0.7.17-7+b2	168.4 kB	479.0 kB	[list of files]
mips64el	0.7.17-7+b2	157.2 kB	552.0 kB	[list of files]
mipsel	0.7.17-7+b2	179.8 kB	508.0 kB	[list of files]
ppc64el	0.7.17-7+b2	170.0 kB	557.0 kB	[list of files]
s390x	0.7.17-7+b2	141.3 kB	472.0 kB	[list of files]