Pakiet źródłowy: bcbio (1.2.9-2)
[contrib]
Odnośniki dla bcbio
Zasoby systemu Debian:
Opiekunowie:
Zasoby zewnętrzne:
Z tego pakietu źródłowego zbudowano następujące pakiety binarne:
- bcbio
- toolkit for analysing high-throughput sequencing data
- python3-bcbio
- library for analysing high-throughput sequencing data
Inne pakiety związane z bcbio
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python3-mock
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python3-pysam
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python3-pyvcf
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python3-vcf
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python3-psutil
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python3-joblib
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atropos
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bcftools
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- adep:
bedtools
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- adep:
biobambam2
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-
- adep:
bowtie2
- ultrafast memory-efficient short read aligner
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- adep:
bwa
- Burrows-Wheeler Aligner
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- adep:
cnvkit
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-
- adep:
fastqc
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-
- adep:
freebayes
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- adep:
gffread
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- adep:
grabix
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-
- adep:
gsort
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- adep:
hisat2
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-
- adep:
hts-nim-tools
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libfreetype6
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lumpy-sv
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mosdepth
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multiqc
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perl
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- adep:
libpicard-java
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- adep:
libvcflib-tools
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- adep:
picard-tools
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- adep:
python3-biopython
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- adep:
python3-cyvcf2
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- adep:
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- adep:
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- adep:
python3-pytest-mock
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- adep:
python3-seqcluster
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- adep:
pythonpy
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- adep:
rapmap
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- adep:
rna-star
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- adep:
r-base-core
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- adep:
r-bioc-htsfilter
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- adep:
r-bioc-degreport
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r-bioc-purecn
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- adep:
r-bioc-summarizedexperiment
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- adep:
r-cran-tidyverse
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- adep:
r-bioc-titancna
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- adep:
r-bioc-tximport
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- adep:
r-other-wasabi
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- adep:
salmon
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-
- adep:
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- adep:
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-
- adep:
seqan-apps
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-
- adep:
seqtk
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- adep:
snpeff
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- adep:
subread
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- adep:
tabix
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-
- adep:
tophat-recondition
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-
- adep:
umis
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-
- adep:
vcfanno
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- adep:
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wham-align
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- adep:
libhts-dev
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python3-sphinx
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