Pakket: tvc (5.0.3+git20151221.80e144e+dfsg-5 en anderen)

[ Bron: tvc  ]

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

Andere aan tvc gerelateerde pakketten

• dep: libarmadillo14 (>= 1:14.0.1+dfsg)

  streamlined C++ linear algebra library

• dep: libbamtools2.5.2 (>= 2.5.2+dfsg)

  dynamic library for manipulating BAM (genome alignment) files

• dep: libc6 (>= 2.38)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, ppc64el, riscv64]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libjsoncpp26 (>= 1.9.6)

  library for reading and writing JSON for C++

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

tvc downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	5.0.3+git20151221.80e144e+dfsg-5+b3	1.088,5 kB	3.505,0 kB	[overzicht]
arm64	5.0.3+git20151221.80e144e+dfsg-5+b3	992,7 kB	3.349,0 kB	[overzicht]
armel	5.0.3+git20151221.80e144e+dfsg-5+b3	963,5 kB	3.177,0 kB	[overzicht]
armhf	5.0.3+git20151221.80e144e+dfsg-5+b3	977,4 kB	2.697,0 kB	[overzicht]
i386	5.0.3+git20151221.80e144e+dfsg-5+b3	1.117,9 kB	3.544,0 kB	[overzicht]
mips64el	5.0.3+git20151221.80e144e+dfsg-5+b3	1.003,8 kB	3.751,0 kB	[overzicht]
ppc64el	5.0.3+git20151221.80e144e+dfsg-5+b3	1.067,7 kB	3.732,0 kB	[overzicht]
riscv64	5.0.3+git20151221.80e144e+dfsg-5+b3	1.048,0 kB	2.913,0 kB	[overzicht]
s390x	5.0.3+git20151221.80e144e+dfsg-5+b3	1.061,0 kB	3.520,0 kB	[overzicht]