Pakket: lighter (1.1.2-7)

[ Bron: lighter  ]

fast and memory-efficient sequencing error corrector

Lighter is a fast, memory-efficient tool for correcting sequencing errors. Lighter avoids counting k-mers. Instead, it uses a pair of Bloom filters, one holding a sample of the input k-mers and the other holding k-mers likely to be correct. As long as the sampling fraction is adjusted in inverse proportion to the depth of sequencing, Bloom filter size can be held constant while maintaining near-constant accuracy. Lighter is parallelized, uses no secondary storage, and is both faster and more memory-efficient than competing approaches while achieving comparable accuracy.

Andere aan lighter gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, i386]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

lighter downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	46,2 kB	124,0 kB	[overzicht]
arm64	44,1 kB	116,0 kB	[overzicht]
armel	44,0 kB	179,0 kB	[overzicht]
armhf	44,1 kB	115,0 kB	[overzicht]
i386	51,1 kB	135,0 kB	[overzicht]
mips64el	48,8 kB	182,0 kB	[overzicht]
ppc64el	49,7 kB	180,0 kB	[overzicht]
s390x	45,8 kB	128,0 kB	[overzicht]