Pakket: bitseq (0.7.5+dfsg-6 en anderen)

[ Bron: bitseq  ]

Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

Andere aan bitseq gerelateerde pakketten

• dep: libc6 (>= 2.29) [niet arm64, riscv64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.34) [riscv64]

  dep: libc6 (>= 2.38) [arm64]

• dep: libgcc-s1 (>= 3.0) [amd64, i386, s390x]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [arm64, mips64el, riscv64]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 11) [arm64, riscv64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 5.2) [niet arm64, riscv64]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-numpy

  Fast array facility to the Python language (Python 3)

• dep: zlib1g (>= 1:1.2.3.3)

  compressiebibliotheek - programma's

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

bitseq downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	0.7.5+dfsg-6	337,2 kB	1.927,0 kB	[overzicht]
arm64	0.7.5+dfsg-6+b1	305,1 kB	2.216,0 kB	[overzicht]
armel	0.7.5+dfsg-6	282,4 kB	1.606,0 kB	[overzicht]
armhf	0.7.5+dfsg-6	286,8 kB	1.158,0 kB	[overzicht]
i386	0.7.5+dfsg-6	362,5 kB	2.022,0 kB	[overzicht]
mips64el	0.7.5+dfsg-6	320,9 kB	2.167,0 kB	[overzicht]
ppc64el	0.7.5+dfsg-6	343,5 kB	2.471,0 kB	[overzicht]
riscv64	0.7.5+dfsg-6+b2	335,9 kB	1.440,0 kB	[overzicht]
s390x	0.7.5+dfsg-6	297,6 kB	1.955,0 kB	[overzicht]