[ Bron: bio-eagle ]
Pakket: bio-eagle (2.4.1-3 en anderen)
Verwijzigingen voor bio-eagle
Debian bronnen:
Het bronpakket bio-eagle downloaden:
Beheerders:
Externe bronnen:
- Homepage [data.broadinstitute.org]
Vergelijkbare pakketten:
Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.
Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
Andere aan bio-eagle gerelateerde pakketten
|
|
|
|
-
- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- Boost.Iostreams Library
-
- dep: libboost-program-options1.83.0 (>= 1.83.0)
- program options library for C++
-
- dep: libc6 (>= 2.34)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 4.2) [i386]
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: libopenblas0
- Optimized BLAS (linear algebra) library (meta)
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- rec: med-config (>= 2.1)
- Debian Med general config package
-
- sug: bio-eagle-examples
- Examples for bio-eagle