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Pakket: libgkarrays1t64 (2.1.0+dfsg-4.2 en anderen)

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library to query large collection of NGS sequences

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

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Pakket downloaden voor alle beschikbare platforms
Platform Versie Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 2.1.0+dfsg-4.2 59,5 kB248,0 kB [overzicht]
amd64 2.1.0+dfsg-4.2 56,2 kB174,0 kB [overzicht]
arm64 2.1.0+dfsg-4.2+b1 53,1 kB247,0 kB [overzicht]
armel 2.1.0+dfsg-4.2 52,5 kB149,0 kB [overzicht]
armhf 2.1.0+dfsg-4.2 51,6 kB133,0 kB [overzicht]
hppa (unofficial port) 2.1.0+dfsg-4.2 69,2 kB193,0 kB [overzicht]
i386 2.1.0+dfsg-4.2 62,7 kB185,0 kB [overzicht]
ia64 (unofficial port) 2.1.0+dfsg-4.2 70,0 kB247,0 kB [overzicht]
m68k (unofficial port) 2.1.0+dfsg-4.2 60,7 kB181,0 kB [overzicht]
mips64el 2.1.0+dfsg-4.2 55,0 kB255,0 kB [overzicht]
ppc64 (unofficial port) 2.1.0+dfsg-4.2 59,0 kB247,0 kB [overzicht]
ppc64el 2.1.0+dfsg-4.2 58,1 kB246,0 kB [overzicht]
riscv64 2.1.0+dfsg-4.2 57,7 kB149,0 kB [overzicht]
s390x 2.1.0+dfsg-4.2 52,5 kB173,0 kB [overzicht]
sh4 (unofficial port) 2.1.0+dfsg-4.2 64,2 kB246,0 kB [overzicht]
sparc64 (unofficial port) 2.1.0+dfsg-4.2 50,0 kB2.107,0 kB [overzicht]
x32 (unofficial port) 2.1.0+dfsg-4.2 56,7 kB169,0 kB [overzicht]