Package: libgkarrays1t64 (2.1.0+dfsg-4.2 and others)

[ Source: libgkarrays  ]

library to query large collection of NGS sequences

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

Other Packages Related to libgkarrays1t64

• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: zlib1g (>= 1:1.1.4) [not armel, armhf, hppa, m68k, sh4]

  compression library - runtime

  dep: zlib1g (>= 1:1.2.3.3) [armel, armhf, hppa, m68k, sh4]

Download libgkarrays1t64

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.1.0+dfsg-4.2	59.5 kB	248.0 kB	[list of files]
amd64	2.1.0+dfsg-4.2	56.2 kB	174.0 kB	[list of files]
arm64	2.1.0+dfsg-4.2+b1	53.1 kB	247.0 kB	[list of files]
armel	2.1.0+dfsg-4.2	52.5 kB	149.0 kB	[list of files]
armhf	2.1.0+dfsg-4.2	51.6 kB	133.0 kB	[list of files]
hppa (unofficial port)	2.1.0+dfsg-4.2	69.2 kB	193.0 kB	[list of files]
i386	2.1.0+dfsg-4.2	62.7 kB	185.0 kB	[list of files]
ia64 (unofficial port)	2.1.0+dfsg-4.2	70.0 kB	247.0 kB	[list of files]
m68k (unofficial port)	2.1.0+dfsg-4.2	60.7 kB	181.0 kB	[list of files]
mips64el	2.1.0+dfsg-4.2	55.0 kB	255.0 kB	[list of files]
ppc64 (unofficial port)	2.1.0+dfsg-4.2	59.0 kB	247.0 kB	[list of files]
ppc64el	2.1.0+dfsg-4.2	58.1 kB	246.0 kB	[list of files]
riscv64	2.1.0+dfsg-4.2	57.7 kB	149.0 kB	[list of files]
s390x	2.1.0+dfsg-4.2	52.5 kB	173.0 kB	[list of files]
sh4 (unofficial port)	2.1.0+dfsg-4.2	64.2 kB	246.0 kB	[list of files]
sparc64 (unofficial port)	2.1.0+dfsg-4.2	50.0 kB	2,107.0 kB	[list of files]
x32 (unofficial port)	2.1.0+dfsg-4.2	56.7 kB	169.0 kB	[list of files]