Pakket: khmer (2.1.2+dfsg-9) [debports]

[ Bron:  ]

in-memory DNA sequence kmer counting, filtering & graph traversal

khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.

Andere aan khmer gerelateerde pakketten

• dep: cython3 (>= 0.26.1)

  C-Extensions for Python 3

• dep: khmer-common

  Pakket niet beschikbaar

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6.1 (>= 2.31)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support bibliotheek

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: libunwind8

  library to determine the call-chain of a program - runtime

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.10)

  dep: python3 (>= 3.9~)

• dep: python3-bz2file

  Pakket niet beschikbaar

• dep: python3-screed (>= 1.0)

  short nucleotide read sequence utils in Python 3

• dep: zlib1g (>= 1:1.2.3.4)

  compressiebibliotheek - programma's

khmer downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
ia64 (unofficial port)	6.427,6 kB	33.935,0 kB	[overzicht]