Pakket: eigensoft (7.2.1+dfsg-1)

[ Bron: eigensoft  ]

reduction of population bias for genetic analyses

The EIGENSOFT package combines functionality from the group's population genetics methods (Patterson et al. 2006) and their EIGENSTRAT stratification method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker's variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes.

Andere aan eigensoft gerelateerde pakketten

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  of libblas.so.3

  virtueel pakket geboden door libatlas3-base, libblas3, libblis2-openmp, libblis2-pthread, libblis2-serial, libopenblas-base

• dep: libc6 (>= 2.23)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgsl23 (>= 2.5)

  GNU Scientific Library (GSL) -- library package

• dep: liblapack3

  Library of linear algebra routines 3 - shared version

  of liblapack.so.3

  virtueel pakket geboden door libatlas3-base, liblapack3, libopenblas-base

• dep: liblapacke

  Library of linear algebra routines 3 - C lib shared version

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• rec: gnuplot

  Command-line driven interactive plotting program.
  Ook een virtueel pakket geboden door: gnuplot-nox, gnuplot-qt, gnuplot-x11

eigensoft downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
i386	393,7 kB	2.700,0 kB	[overzicht]