Pakket: velvet (1.2.10+dfsg1-7)

[ Bron: velvet  ]

Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Purpose: Analysing

Andere aan velvet gerelateerde pakketten

• dep: libc6 (>= 2.29)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: zlib1g (>= 1:1.2.0.2)

  compressiebibliotheek - programma's

• sug: velvet-example

  Example data for the Velvet sequence assembler

velvet downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	662,4 kB	1.255,0 kB	[overzicht]
arm64	643,7 kB	1.214,0 kB	[overzicht]
armel	659,4 kB	1.344,0 kB	[overzicht]
armhf	645,5 kB	1.049,0 kB	[overzicht]
i386	687,6 kB	1.430,0 kB	[overzicht]
mips64el	662,0 kB	1.432,0 kB	[overzicht]
mipsel	679,6 kB	1.485,0 kB	[overzicht]
ppc64el	672,3 kB	1.586,0 kB	[overzicht]
s390x	648,1 kB	1.302,0 kB	[overzicht]