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[ Source: velvet  ]

Paketti: velvet (1.2.10+dfsg1-7)

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Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Purpose: Analysing

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amd64 662.4 kt1,255.0 kt [tiedostoluettelo]
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armel 659.4 kt1,344.0 kt [tiedostoluettelo]
armhf 645.5 kt1,049.0 kt [tiedostoluettelo]
i386 687.6 kt1,430.0 kt [tiedostoluettelo]
mips64el 662.0 kt1,432.0 kt [tiedostoluettelo]
mipsel 679.6 kt1,485.0 kt [tiedostoluettelo]
ppc64el 672.3 kt1,586.0 kt [tiedostoluettelo]
s390x 648.1 kt1,302.0 kt [tiedostoluettelo]