Package: fml-asm (0.1+git20190320.b499514-2~0exp and others)

[ Source: fermi-lite  ]

Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

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Download fml-asm

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.1+git20190320.b499514-2~0exp	72.7 kB	211.0 kB	[list of files]
amd64	0.1+git20190320.b499514-2~0exp	66.0 kB	155.0 kB	[list of files]
arm64	0.1+git20190320.b499514-2~0exp	59.3 kB	147.0 kB	[list of files]
armel	0.1+git20190320.b499514-2~0exp	66.9 kB	158.0 kB	[list of files]
armhf	0.1+git20190320.b499514-2~0exp	66.2 kB	118.0 kB	[list of files]
hppa (unofficial port)	0.1+git20190320.b499514-2~0exp	81.2 kB	196.0 kB	[list of files]
i386	0.1+git20190320.b499514-2~0exp	84.5 kB	198.0 kB	[list of files]
ia64 (unofficial port)	0.1+git20190320.b499514-2~0exp	95.7 kB	311.0 kB	[list of files]
m68k (unofficial port)	0.1+git20190320.b499514-2~0exp	70.0 kB	162.0 kB	[list of files]
mips64el	0.1+git20190320.b499514-2~0exp	68.8 kB	219.0 kB	[list of files]
ppc64 (unofficial port)	0.1+git20190320.b499514-2~0exp	78.7 kB	275.0 kB	[list of files]
ppc64el	0.1+git20190320.b499514-2~0exp	76.5 kB	211.0 kB	[list of files]
riscv64	0.1+git20190320.b499514-2~0exp+b1	72.4 kB	132.0 kB	[list of files]
s390x	0.1+git20190320.b499514-2~0exp	63.0 kB	167.0 kB	[list of files]
sh4 (unofficial port)	0.1+git20190320.b499514-2~0exp	91.4 kB	210.0 kB	[list of files]
sparc64 (unofficial port)	0.1+git20190320.b499514-2~0exp	59.8 kB	1,044.0 kB	[list of files]
x32 (unofficial port)	0.1+git20190320.b499514-2~0exp	66.0 kB	150.0 kB	[list of files]