パッケージ: python3-presto (0.7.2-1)
python3-presto に関するリンク
Debian の資源:
presto ソースパッケージをダウンロード:
メンテナ:
外部の資源:
- ホームページ [presto.readthedocs.io]
類似のパッケージ:
toolkit for processing B and T cell sequences (Python3 module)
pRESTO is a toolkit for processing raw reads from high-throughput sequencing of B cell and T cell repertoires.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of lymphocyte repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling and conversion operations are also included.
This package provides the presto Python3 module.
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- dep: vsearch [amd64, arm64, ppc64el]
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python3-presto のダウンロード
| アーキテクチャ | パッケージサイズ | インストールサイズ | ファイル |
|---|---|---|---|
| amd64 | 77.7 kB | 513.0 kB | [ファイル一覧] |
| arm64 | 77.7 kB | 513.0 kB | [ファイル一覧] |
| armel | 77.7 kB | 513.0 kB | [ファイル一覧] |
| armhf | 77.7 kB | 513.0 kB | [ファイル一覧] |
| i386 | 77.7 kB | 513.0 kB | [ファイル一覧] |
| mips64el | 77.7 kB | 513.0 kB | [ファイル一覧] |
| ppc64el | 77.7 kB | 513.0 kB | [ファイル一覧] |
| riscv64 | 77.7 kB | 513.0 kB | [ファイル一覧] |
| s390x | 77.7 kB | 513.0 kB | [ファイル一覧] |