软件包：python3-presto（0.7.2-1）

[ 源代码： presto  ]

toolkit for processing B and T cell sequences (Python3 module)

pRESTO is a toolkit for processing raw reads from high-throughput sequencing of B cell and T cell repertoires.

Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of lymphocyte repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling and conversion operations are also included.

This package provides the presto Python3 module.

其他与 python3-presto 有关的软件包

• dep: cd-hit

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• dep: python3-biopython

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• dep: python3-numpy

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• dep: python3-packaging

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• dep: python3-pandas

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• dep: vsearch [amd64, arm64, ppc64el]

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下载 python3-presto

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
amd64	77.7 kB	513.0 kB	[文件列表]
arm64	77.7 kB	513.0 kB	[文件列表]
armel	77.7 kB	513.0 kB	[文件列表]
armhf	77.7 kB	513.0 kB	[文件列表]
i386	77.7 kB	513.0 kB	[文件列表]
mips64el	77.7 kB	513.0 kB	[文件列表]
ppc64el	77.7 kB	513.0 kB	[文件列表]
riscv64	77.7 kB	513.0 kB	[文件列表]
s390x	77.7 kB	513.0 kB	[文件列表]