[ ソース: gubbins ]
パッケージ: gubbins (2.4.1-5)
gubbins に関するリンク
Debian の資源:
gubbins ソースパッケージをダウンロード:
メンテナ:
外部の資源:
- ホームページ [sanger-pathogens.github.io]
類似のパッケージ:
phylogenetic analysis of genome sequences
Gubbins supports rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences.
Gubbins (Genealogies Unbiased By recomBinations In Nucleotide Sequences) is an algorithm that iteratively identifies loci containing elevated densities of base substitutions while concurrently constructing a phylogeny based on the putative point mutations outside of these regions. Simulations demonstrate the algorithm generates highly accurate reconstructions under realistic models of short-term bacterial evolution, and can be run in only a few hours on alignments of hundreds of bacterial genome sequences.
その他の gubbins 関連パッケージ
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- dep: libc6 (>= 2.29)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: python3
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- dep: python3-dendropy
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- dep: raxml
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- dep: zlib1g (>= 1:1.1.4)
- 圧縮ライブラリ - ランタイム