Package: pbsim (1.0.3+git20180330.e014b1d+dfsg-3 and others)

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simulator for PacBio sequencing reads

PacBio DNA sequencers produce two types of characteristic reads: CCS (short and low error rate) and CLR (long and high error rate), both of which could be useful for de novo assembly of genomes. PBSIM simulates those PacBio reads from a reference sequence by using either a model-based or sampling-based simulation. Simulated reads are useful, for example, when developing or evaluating sequence assemblers targeted at PacBio data.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::c++, Role: Program, Purpose: use::simulating, works-with::biological-sequence

Other Packages Related to pbsim

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dep: libc6 (>= 2.34) [not alpha, arm64, ia64, sh4]

GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.36) [sh4]

dep: libc6 (>= 2.38) [arm64]
dep: libc6.1 (>= 2.30) [ia64]

GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.34) [alpha]
dep: libgcc-s1 (>= 3.0) [sparc64]

GCC támogató programkönyvtár

dep: libgcc-s1 (>= 3.3.4) [sh4]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [ia64]

dep: libgcc-s1 (>= 7) [i386]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC támogató programkönyvtár
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC támogató programkönyvtár
dep: libstdc++6 (>= 4.1.1) [sparc64]

GNU Standard C++ Library v3

Download pbsim

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	26.0 kB	121.0 kB	[list of files]
amd64	1.0.3+git20180330.e014b1d+dfsg-3	24.9 kB	100.0 kB	[list of files]
arm64	1.0.3+git20180330.e014b1d+dfsg-3+b1	24.5 kB	121.0 kB	[list of files]
armel	1.0.3+git20180330.e014b1d+dfsg-3	24.5 kB	91.0 kB	[list of files]
armhf	1.0.3+git20180330.e014b1d+dfsg-3	23.9 kB	83.0 kB	[list of files]
hppa (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	26.3 kB	92.0 kB	[list of files]
i386	1.0.3+git20180330.e014b1d+dfsg-3	25.8 kB	99.0 kB	[list of files]
ia64 (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-2	31.1 kB	128.0 kB	[list of files]
m68k (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	25.3 kB	103.0 kB	[list of files]
mips64el	1.0.3+git20180330.e014b1d+dfsg-3	25.4 kB	122.0 kB	[list of files]
ppc64 (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	26.7 kB	120.0 kB	[list of files]
ppc64el	1.0.3+git20180330.e014b1d+dfsg-3	27.1 kB	120.0 kB	[list of files]
riscv64	1.0.3+git20180330.e014b1d+dfsg-3+b1	25.0 kB	89.0 kB	[list of files]
s390x	1.0.3+git20180330.e014b1d+dfsg-3	23.6 kB	92.0 kB	[list of files]
sh4 (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	29.4 kB	119.0 kB	[list of files]
sparc64 (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	24.2 kB	1,081.0 kB	[list of files]
x32 (unofficial port)	1.0.3+git20180330.e014b1d+dfsg-3	24.8 kB	91.0 kB	[list of files]