Package: meryl (0~20150903+r2013-6)

[ Source: kmer  ]

in- and out-of-core kmer counting and utilities

meryl computes the kmer content of genomic sequences. Kmer content is represented as a list of kmers and the number of times each occurs in the input sequences. The kmer can be restricted to only the forward kmer, only the reverse kmer, or the canonical kmer (lexicographically smaller of the forward and reverse kmer at each location). Meryl can report the histogram of counts, the list of kmers and their counts, or can perform mathematical and set operations on the processed data files.

This package is part of the Kmer suite.

Other Packages Related to meryl

• dep: libc6 (>= 2.14) [amd64]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.7) [armhf, i386]

• dep: libgcc1 (>= 1:3.0) [amd64, arm64]

  GCC támogató programkönyvtár

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.2) [i386]

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

• sug: gridengine-client

  Utilities for Grid Engine queue management

Download meryl

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Architecture	Package Size	Installed Size	Files
amd64	193.8 kB	1,471.0 kB	[list of files]
arm64	190.2 kB	1,319.0 kB	[list of files]
armhf	215.7 kB	1,339.0 kB	[list of files]
i386	235.0 kB	1,867.0 kB	[list of files]