Paketti: ataqv (1.3.1+ds-2 ja muut)

[ Source: ataqv  ]

ATAC-seq QC and visualization

A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.

Tagit: Interface Toolkit: Ncurses TUI

Muut pakettiin ataqv liittyvät paketit

• dep: fonts-font-awesome

  iconic font designed for use with Twitter Bootstrap

• dep: libboost-chrono1.83.0t64 (>= 1.83.0)

  C++ representation of time duration, time point, and clocks

• dep: libboost-filesystem1.83.0 (>= 1.83.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.83.0 (>= 1.83.0)

  Boost.Iostreams -kirjasto

• dep: libc6 (>= 2.34) [ei arm64, i386]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.38) [arm64, i386]

• dep: libgcc-s1 (>= 3.0) [amd64]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ppc64el]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-jquery-datatables

  jQuery plug-in that makes nice tables from different data sources

• dep: libjs-jquery-datatables-extensions

  extensions for the jQuery plug-in for tables from different data sources

• dep: libncurses6 (>= 6)

  jaetut kirjastot päätteen hallintaan

• dep: libstdc++6 (>= 13.1) [ei arm64, i386]

  GNU standardi C++ -kirjasto, versio 3

  dep: libstdc++6 (>= 14) [arm64, i386]

• dep: node-d3

  Data-Driven Documents to visualize data

• dep: node-normalize.css

  Modern alternative to CSS resets

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: macs

  Model-based Analysis of ChIP-Seq on short reads sequencers

• sug: picard-tools

  Command line tools to manipulate SAM and BAM files

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: wget

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Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	1.3.1+ds-2+b2	3,320.5 kt	6,526.0 kt	[tiedostoluettelo]
arm64	1.3.1+ds-2+b3	3,257.8 kt	6,465.0 kt	[tiedostoluettelo]
armel	1.3.1+ds-2+b2	3,238.7 kt	6,232.0 kt	[tiedostoluettelo]
armhf	1.3.1+ds-2+b2	3,246.5 kt	5,848.0 kt	[tiedostoluettelo]
i386	1.3.1+ds-2+b3	3,355.6 kt	6,631.0 kt	[tiedostoluettelo]
mips64el	1.3.1+ds-2+b2	3,249.9 kt	6,868.0 kt	[tiedostoluettelo]
ppc64el	1.3.1+ds-2+b2	3,296.8 kt	6,723.0 kt	[tiedostoluettelo]
riscv64	1.3.1+ds-2+b2	3,311.8 kt	6,207.0 kt	[tiedostoluettelo]