Paketti: bwa (0.7.17-7 ja muut) [debports]

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Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Muut pakettiin bwa liittyvät paketit

• dep: libc6 (>= 2.39)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: zlib1g (>= 1:1.2.3.3)

  pakkauskirjaston ajonaikaistiedostot

• rec: perl

  Larry Wallin kieli tekstitiedostojen analysointia ja raportointia varten

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

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Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
sh4 (epävirallinen siirros)	0.7.17-7+b4	273.3 kt	448.0 kt	[tiedostoluettelo]