Paketti: r-cran-alakazam (0.3.0-1) [debports]
Links for r-cran-alakazam
Debian-palvelut:
Imuroi lähdekoodipaketti :
Ei löytynytYlläpitäjät:
External Resources:
- Kotisivu [cran.r-project.org]
Samankaltaisia paketteja:
Immunoglobulin Clonal Lineage and Diversity Analysis
Alakazam is part of the Immcantation analysis framework for Adaptive Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of tools to investigate lymphocyte receptor clonal lineages, diversity, gene usage, and other repertoire level properties, with a focus on high-throughput immunoglobulin (Ig) sequencing.
Alakazam serves five main purposes:
* Providing core functionality for other R packages in the Immcantation framework. This includes common tasks such as file I/O, basic DNA sequence manipulation, and interacting with V(D)J segment and gene annotations. * Providing an R interface for interacting with the output of the pRESTO and Change-O tool suites. * Performing lineage reconstruction on clonal populations of Ig sequences and analyzing the topology of the resultant lineage trees. * Performing clonal abundance and diversity analysis on lymphocyte repertoires. * Performing physicochemical property analyses of lymphocyte receptor sequences.
Muut pakettiin r-cran-alakazam liittyvät paketit
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- dep: libc6 (>= 2.4)
- GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgcc2 (>= 4.2.1)
- Paketti ei saatavilla
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- dep: libstdc++6 (>= 5.2)
- GNU standardi C++ -kirjasto, versio 3
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- dep: r-api-3.5
- Paketti ei saatavilla
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- dep: r-base-core (>= 3.6.1-2)
- GNU R core of statistical computation and graphics system
Imuroi r-cran-alakazam
Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
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m68k (epävirallinen siirros) | 1,706.4 kt | 2,053.0 kt | [tiedostoluettelo] |