Paketti: flexbar (1:3.5.0-5)

[ Source: flexbar  ]

flexible barcode and adapter removal for sequencing platforms

Flexbar preprocesses high-throughput sequencing data efficiently. It demultiplexes barcoded runs and removes adapter sequences. Moreover, trimming and filtering features are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform.

Parameter names changed in Flexbar. Please review scripts. The recent months, default settings were optimised, several bugs were fixed and various improvements were made, e.g. revamped command-line interface, new trimming modes as well as lower time and memory requirements.

Muut pakettiin flexbar liittyvät paketit

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.0) [ei armel, armhf, i386, mipsel]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [mipsel]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libstdc++6 (>= 12)

  GNU standardi C++ -kirjasto, versio 3

• dep: libtbb12 (>= 2021.4.0) [amd64]

  parallelism library for C++ - runtime files

  dep: libtbb12 (>= 2021.8.0) [ei amd64]

• dep: zlib1g (>= 1:1.1.4)

  pakkauskirjaston ajonaikaistiedostot

Imuroi flexbar

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	347.6 kt	1,165.0 kt	[tiedostoluettelo]
arm64	298.4 kt	1,149.0 kt	[tiedostoluettelo]
armel	288.9 kt	1,040.0 kt	[tiedostoluettelo]
armhf	299.0 kt	820.0 kt	[tiedostoluettelo]
i386	353.1 kt	1,184.0 kt	[tiedostoluettelo]
mips64el	285.8 kt	1,321.0 kt	[tiedostoluettelo]
mipsel	287.4 kt	1,314.0 kt	[tiedostoluettelo]
ppc64el	336.8 kt	1,341.0 kt	[tiedostoluettelo]
s390x	302.9 kt	1,185.0 kt	[tiedostoluettelo]