Package: smithwaterman (0.0+git20160702.2610e25-12 and others)

[ Source: libsmithwaterman  ]

determine similar regions between two strings or genomic sequences

The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure.

Other Packages Related to smithwaterman

• dep: libc6 (>= 2.38) [not alpha, ia64, m68k, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.4) [m68k]

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.34) [ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 13.1) [not ia64, m68k]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 5.2) [ia64, m68k]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

Download smithwaterman

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.0+git20160702.2610e25-12+b2	12.7 kB	99.0 kB	[list of files]
amd64	0.0+git20160702.2610e25-12+b2	13.1 kB	59.0 kB	[list of files]
arm64	0.0+git20160702.2610e25-12+b2	12.4 kB	99.0 kB	[list of files]
armel	0.0+git20160702.2610e25-12+b2	12.0 kB	50.0 kB	[list of files]
armhf	0.0+git20160702.2610e25-12+b2	11.9 kB	50.0 kB	[list of files]
hppa (unofficial port)	0.0+git20160702.2610e25-12+b2	12.8 kB	51.0 kB	[list of files]
i386	0.0+git20160702.2610e25-12+b2	13.3 kB	62.0 kB	[list of files]
ia64 (unofficial port)	0.0+git20160702.2610e25-12+b1	14.8 kB	65.0 kB	[list of files]
m68k (unofficial port)	0.0+git20160702.2610e25-12	12.9 kB	58.0 kB	[list of files]
mips64el	0.0+git20160702.2610e25-12+b2	12.9 kB	100.0 kB	[list of files]
ppc64 (unofficial port)	0.0+git20160702.2610e25-12+b2	13.3 kB	99.0 kB	[list of files]
ppc64el	0.0+git20160702.2610e25-12+b2	13.2 kB	99.0 kB	[list of files]
riscv64	0.0+git20160702.2610e25-12+b2	12.3 kB	51.0 kB	[list of files]
s390x	0.0+git20160702.2610e25-12+b2	12.7 kB	55.0 kB	[list of files]
sh4 (unofficial port)	0.0+git20160702.2610e25-12+b2	13.4 kB	98.0 kB	[list of files]
sparc64 (unofficial port)	0.0+git20160702.2610e25-12+b2	12.2 kB	1,060.0 kB	[list of files]
x32 (unofficial port)	0.0+git20160702.2610e25-12+b2	13.0 kB	58.0 kB	[list of files]