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Package: libhts3t64 (1.21+ds-0+exp2)

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Experimental package

Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.

C library for high-throughput sequencing data formats

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

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Download libhts3t64

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 446.5 kB1,406.0 kB [list of files]
amd64 451.9 kB1,120.0 kB [list of files]
arm64 415.8 kB1,272.0 kB [list of files]
armel 393.0 kB987.0 kB [list of files]
armhf 397.3 kB747.0 kB [list of files]
hppa (unofficial port) 459.6 kB1,192.0 kB [list of files]
i386 494.1 kB1,227.0 kB [list of files]
m68k (unofficial port) 395.8 kB979.0 kB [list of files]
mips64el 404.7 kB1,383.0 kB [list of files]
ppc64 (unofficial port) 476.4 kB1,591.0 kB [list of files]
ppc64el 488.9 kB1,591.0 kB [list of files]
riscv64 458.9 kB932.0 kB [list of files]
s390x 451.6 kB1,179.0 kB [list of files]
sh4 (unofficial port) 501.6 kB1,142.0 kB [list of files]
sparc64 (unofficial port) 391.8 kB5,264.0 kB [list of files]
x32 (unofficial port) 454.4 kB1,079.0 kB [list of files]