Paket: r-bioc-htsfilter (1.44.0+dfsg-1)

[ Quellcode: r-bioc-htsfilter  ]

GNU R filter replicated high-throughput transcriptome sequencing data

This package implements a filtering procedure for replicated transcriptome sequencing data based on a global Jaccard similarity index in order to identify genes with low, constant levels of expression across one or more experimental conditions.

Andere Pakete mit Bezug zu r-bioc-htsfilter

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.19

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-deseq2

  R package for RNA-Seq Differential Expression Analysis

• dep: r-bioc-edger

  Empirische Analyse von digitalen Genexpressionsdaten mit R

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-edaseq

  GNU R exploratory data analysis and normalization for RNA-Seq

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  Konvertierung von R-Markdown-Dokumenten in verschiedene Formate

• sug: r-cran-testthat

  GNU R testsuite

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Architektur	Paketgröße	Größe (installiert)	Dateien
all	160,3 kB	236,0 kB	[Liste der Dateien]